Attendance in EEBMB 2019
70th Annual Conference of the Hellenic Society for Biochemistry and Molecular Biology. 29 November - 1 December 2019, Athens, Greece.
to the ELIXIR-GR node of Democritus University of Thrace
ELIXIR-GR is the Greek National Node of the ESFRI European RI ELIXIR, a distributed e-Infrastructure aiming at the construction of a sustainable European infrastructure for biological information. ELIXIR-GR supports life-science research and its translation to medicine, biological sciences and society. It offers a catalogue of tools, services and benchmarks, ensuring best practices as well as sustainability and interoperability with other biological and medical science infrastructures.
Democritus University of Thrace is participating node in ELIXIR-GR, focused on developing algorithms and pipelines in genomic analysis, with applications in humans, animals and plants.
70th Annual Conference of the Hellenic Society for Biochemistry and Molecular Biology. 29 November - 1 December 2019, Athens, Greece.
41ο Annual Conference of the Hellenic Society for Biological Sciences. 9-11 May 2019, Katerini, Greece.
17th European Conference in Computational Biology. 8-12 September 2018, Athens, Greece.
69th Annual Conference of the Hellenic Society of Biochemistry and Molecular Biology. 23-25 November 2018, Larisa, Greece.
40th Annual Conference of the Hellenic Society for Biological Sciences. 24-26 May 2018, Veria, Greece.
In this section we present the tools, training platforms and pilot projects we work on, made available through ELIXIR-GR.
Our algorithm for identifying PCA-correlated SNPs takes as input a properly encoded SNP data matrix and outputs a score for each SNP. SNPs corresponding to the highest scores are typically the most informative in reproducing the structure of the population.
Performs ranking of variants in genomic datasets, integrating information from multiple sources to prioritize each variant by its deleteriousness, novelty and existing information.
The Network Analyzer is a tool to visualize the output from the database for annotation, visualization and integrated discovery (DAVID, https://david.ncifcrf.gov) in order to reveal overlapping biological connections for a list of relevant genes.
Implementing genomewide association studies for the identification of genes that underlie disease – educational material.http://genomap.mbg.duth.gr/index.php/23-educational-material
To be described.
A pilot study for the discovery of ncRNA biomarkers. Functional annotation of epigenetic and transcription regulation factors. Extraction of molecular signatures. Clarification of the regulatory pathways in homeostasis and malignancy.
The members of the team.
Associate Professor at DUTH
Principal Investigator, management and coordination of the function of the infrastructure, compilation of deliverables, publicity
Associate Professor at DUTH
Guiding role / Participation in the final deliverables report
Associate Professor at DUTH
Participation in the development and function of the infrastructure
Postdoctoral Research Associate
Participation in the development, function and publicity of the infrastructure.
Postdoctoral Research Associate
Participation in the development, function and publicity of the infrastructure.
Research Associate
Participation in the development, function and publicity of the infrastructure.
Research Associate
Participation in the development, function and publicity of the infrastructure.
Research Associate
Participation in the development, function and publicity of the infrastructure.
Postdoctoral Research Associate
Participation in the development, function and publicity of the infrastructure.
Research Associate
Participation in the development, function and publicity of the infrastructure.
Given the nature of the ELIXIR-GR infrastructure, contact with the researcher community that will utilize the services described above is important. Any inquiries on ELIXIR-GR or any issues with our services, please contact us using this form.